The detailed information of tRNA gene sequence


Sequence ID>SRA1001537
Genome IDSRR001069.9322
Search identical group
Phylum/ClassTilapia Farm, viral community isolated from the gut contents of hybrid striped bass from Kent SeaTech (Salton Sea, CA; fish showed no sign of disease) (SRP000157)
Species
Start position on genome 104
End posion on genome 28
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ctttttttat
tRNA gene sequence 
TGGGAAATAGCTCAATTTGGTAGAGCACTTAGTTTGGGTCTAAGGGGTTGCAGGTTCAAG
TCCTGTTTTTCCAACCA
Downstream region at tRNA end position 
aatatgagat
Secondary structure (Cloverleaf model)
>SRA1001537	Pro	TGG
                   t      ACCA aatatgagat
                     T - A
                     G - C
                     G - C
                     G + T
                     A - T
                     A - T
                     A - T          T G
                    T     T G T C C     A
      T A A        A      + | | | |     A
    T       C T C G       G C A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGTT
                    C - G
                    T - A
                    T - A
                    A - T
                    G - C
                  T       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK