The detailed information of tRNA gene sequence


Sequence ID>SRA1001548
Genome IDSRR001070.10330
Search identical group
Phylum/ClassTilapia Farm, viral community isolated from the gut contents of hybrid striped bass from Kent SeaTech (Salton Sea, CA, fish were sick at time of sampling) (SRP000158)
Species
Start position on genome 18
End posion on genome 92
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
agtgtgagac
tRNA gene sequence 
ACTCTCGTAGCTCACCGGTAGAGCAGCTCCCTGATACGGAGAAGGTAGATGGTTCAATTC
CACCCGAGAGTACCA
Downstream region at tRNA end position 
aaacttaaat
Secondary structure (Cloverleaf model)
>SRA1001548	Ile	GAT
                   c      ACCA aaacttaaat
                     A - T
                     C - G
                     T - A
                     C - G
                     T - A
                     C - G
                     G - C          T T
                    T     C C A C C     A
        C A        A      |   | | |     A
      C     C T C G       G A T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTA
                    G   A
                    C - G
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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