The detailed information of tRNA gene sequence


Sequence ID>SRA1001598
Genome IDSRR001073.13144
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton See, CA) (SRP000161)
Species
Start position on genome 82
End posion on genome 11
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
gagttttcga
tRNA gene sequence 
GCCCTGTTAGCTCAGCGGTAGAGCATTAGGCTTTTAACCTAAGGGTCGCGGGTTCGGTCC
CCGCACAGGGTGttc
Downstream region at tRNA end position 
aatctttnnn
Secondary structure (Cloverleaf model)
>SRA1001598	Lys	TTT
                   a      Gttc aatctttnnn
                     G + T
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C
                     T - A          C T
                    T     C G C C C     G
        G A        A      | | | | |     G
      C     C T C G       G C G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    T - A
                    T - A
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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