The detailed information of tRNA gene sequence


Sequence ID>SRA1001600
Genome IDSRR001073.16321
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton See, CA) (SRP000161)
Species
Start position on genome 88
End posion on genome 14
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
aacagtatat
tRNA gene sequence 
GCCCGCGTAGCTCAGTGGAAGAGCAGTAGCCTTCTAAGCTAAAGGTCGATGGTTCGATCC
CATCCGCGGGTACCA
Downstream region at tRNA end position 
atttaaaatt
Secondary structure (Cloverleaf model)
>SRA1001600	Arg	TCT
                   t      ACCA atttaaaatt
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C          C T
                    T     C T A C C     A
        G A        A      | | | | |     G
      T     C T C G       G A T G G     C
      G     | | | |                 T T
      G     G A G C
        A A        A     AGGTC
                    G   A
                    T - A
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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