The detailed information of tRNA gene sequence


Sequence ID>SRA1001604
Genome IDSRR001073.27219
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton See, CA) (SRP000161)
Species
Start position on genome 96
End posion on genome 22
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nnntcaccat
tRNA gene sequence 
GGCGGTGTAGCTCAGTGGTAGAGCAGAGGAATCATAATCCTTTGGTCGGGGGTTCAAATC
CCTCCACCGCCACCA
Downstream region at tRNA end position 
cctggacagt
Secondary structure (Cloverleaf model)
>SRA1001604	Met	CAT
                   t      ACCA cctggacagt
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C T C C C     A
        G A        A      | + | | |     A
      T     C T C G       G G G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     TGGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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