The detailed information of tRNA gene sequence


Sequence ID>SRA1001610
Genome IDSRR001073.48013
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton See, CA) (SRP000161)
Species
Start position on genome 20
End posion on genome 94
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
taattaaatt
tRNA gene sequence 
GGGGGATTAGCTCAGCTGGCTAGAGCGCCTGCCTTGCACGCAGGAGGTCAACGGTTCGAC
TCCGTTATTCTCCACag
Downstream region at tRNA end position 
atagnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001610	Ala	TGC
                   t      ACag atagnnnnnn
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     A - T
                     T - A          T C
                    T     T T G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A A C G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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