The detailed information of tRNA gene sequence


Sequence ID>SRA1001615
Genome IDSRR001074.15275
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from prebead pond at Kent SeaTech (Salton Sea, CA) (SRP000162)
Species
Start position on genome 35
End posion on genome 111
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcgcggctac
tRNA gene sequence 
GGGCCTTTAGCTCAGTCGGTTAGAGCAGAGGACTCATAATCCTTTGGTCCCGGGTTCGAG
CCCCGGAGGGCCCACCA
Downstream region at tRNA end position 
aannnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001615	Met	CAT
                   c      ACCA aannnnnnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     T - A          C G
                    T     G G C C C     A
      T G A        A      | | | | |     G
    C       C T C G       C C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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