The detailed information of tRNA gene sequence


Sequence ID>SRA1001621
Genome IDSRR001074.41596
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from prebead pond at Kent SeaTech (Salton Sea, CA) (SRP000162)
Species
Start position on genome 13
End posion on genome 88
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tgccgaattt
tRNA gene sequence 
GGGGTTATAGCTCAGCTGGGAGAGCGCTTGCATGGCATGCAAGAGGTCCGCGGTTCGATC
CCGCGTAGCTCCACCA
Downstream region at tRNA end position 
aattnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001621	Ala	GGC
                   t      ACCA aattnnnnnn
                     G - C
                     G - C
                     G + T
                     G - C
                     T + G
                     T - A
                     A - T          C T
                    T     G C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       C G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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