The detailed information of tRNA gene sequence


Sequence ID>SRA1001623
Genome IDSRR001075.4156
Search identical group
Phylum/ClassTilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000163)
Species
Start position on genome 97
End posion on genome 14
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
nnnnntaaac
tRNA gene sequence 
GAGACTGTGGCGTAATCGGTAGCCGCAGCAGACTTAAAATCTGCCGCCATGTGCGTGAGG
GTTCGAGTCCCTCCAGTCTCACCA
Downstream region at tRNA end position 
aagaactcga
Secondary structure (Cloverleaf model)
>SRA1001623	Leu	TAA
                   c      ACCA aagaactcga
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     T - A
                     G - C          T G
                    T     C T C C C     A
      T A A        G      | | | | |     G
    C       T G C G       G A G G G     C
    G         | | |                 T T
    G       C C G C
      T A G        A     CGCCATGTGCGT
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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