The detailed information of tRNA gene sequence


Sequence ID>SRA1001628
Genome IDSRR001075.20461
Search identical group
Phylum/ClassTilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000163)
Species
Start position on genome 87
End posion on genome 11
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
aaaagcaatt
tRNA gene sequence 
GGTTCGGTAGCTCAGTTGGATAGAGCAACAGACTTCTAATCTGTAGGTCGTAGGTTCGAC
TCCTACCCGAATCACAA
Downstream region at tRNA end position 
tggagaatga
Secondary structure (Cloverleaf model)
>SRA1001628	Arg	TCT
                   t      ACAA tggagaatga
                     G - C
                     G + T
                     T - A
                     T - A
                     C - G
                     G - C
                     G - C          T C
                    T     C A T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTC
                    A - T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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