The detailed information of tRNA gene sequence


Sequence ID>SRA1001630
Genome IDSRR001075.26210
Search identical group
Phylum/ClassTilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000163)
Species
Start position on genome 10
End posion on genome 86
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position
ngcgtaccat
tRNA gene sequence
GTCCCGTTAGCTCAGTTGGATAGAGCAACAACCTTCTAAGTTGTGGGTCAGACGTTCGAA
TCGTCTACGGGATACCA
Downstream region at tRNA end position
tcaattaact
Secondary structure (Cloverleaf model)
>SRA1001630	Arg	TCT
                   t      ACCA tcaattaact
                     G + T
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     T C T G C     A
      T G A        A      | | | | |     G
    T       C T C G       A G A C G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGTC
                    A - T
                    C - G
                    A - T
                    A - T
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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