The detailed information of tRNA gene sequence


Sequence ID>SRA1001632
Genome IDSRR001075.34928
Search identical group
Phylum/ClassTilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000163)
Species
Start position on genome 8
End posion on genome 81
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
nnntggtaat
tRNA gene sequence 
GGGGCTATCGTTTAGTGGCAAGACTTCCGGTTGTCTACCGGAGTACTGGAGTTCGATTCT
CCATAGCCCAGCCA
Downstream region at tRNA end position 
ttgcgggttg
Secondary structure (Cloverleaf model)
>SRA1001632	Asp	GTC
                   t      GCCA ttgcgggttg
                     G   A
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T          T T
                    T     A C C T C     A
        G A        C      | | | | |     G
      T     T T T G       T G G A G     C
      G     | + | |                 T T
      G     A G A C
        C A        T     GTAC
                    T - A
                    C - G
                    C - G
                    G - C
                    G - C
                  T       A
                  T       T
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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