The detailed information of tRNA gene sequence


Sequence ID>SRA1001634
Genome IDSRR001075.49090
Search identical group
Phylum/ClassTilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000163)
Species
Start position on genome 18
End posion on genome 92
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
cgcaccaatc
tRNA gene sequence 
GCTCCGTTAGCTCAGTGGTAGAGCAGCCGCCTTGTAAGCGGCAGGTCGGGGGTTCAAGTC
CCTCACGGAGCACCA
Downstream region at tRNA end position 
cattgtgagg
Secondary structure (Cloverleaf model)
>SRA1001634	Thr	TGT
                   c      ACCA cattgtgagg
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     G - C
                     T - A          T G
                    T     C T C C C     A
        G A        A      | + | | |     A
      T     C T C G       G G G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    G - C
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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