The detailed information of tRNA gene sequence


Sequence ID>SRA1001642
Genome IDSRR001076.21661
Search identical group
Phylum/ClassTilapia Farm, viral fraction from prebead pond at Kent SeaTech (Salton Sea, CA) (SRP000164)
Species
Start position on genome 99
End posion on genome 24
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
gtaaaggaca
tRNA gene sequence 
GCCGTCTTAGCTCCAGCGGTAGAGCAATCGCCTTGTAAGCGATAGGTCGTCGGTTCGAAT
CCGACAGACGGCACCA
Downstream region at tRNA end position 
taatggatac
Secondary structure (Cloverleaf model)
>SRA1001642	Thr	TGT
                   a      ACCA taatggatac
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A
                     C - G
                     T - A          T A
                    T     C A G C C     A
      G A C        A      | | | | |     G
    C       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    A - T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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