The detailed information of tRNA gene sequence


Sequence ID>SRA1001647
Genome IDSRR001076.43221
Search identical group
Phylum/ClassTilapia Farm, viral fraction from prebead pond at Kent SeaTech (Salton Sea, CA) (SRP000164)
Species
Start position on genome 81
End posion on genome 7
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
ctaaccacat
tRNA gene sequence 
GTACCTATAGCTCAATGGTGGAGCAAAGAGCTGTTAACTCTTAGGTTGTTAGTTCGAGTC
TAGCTAGGTACGCAA
Downstream region at tRNA end position 
acagatnnnn
Secondary structure (Cloverleaf model)
>SRA1001647	Asn	GTT
                   t      GCAA acagatnnnn
                     G - C
                     T - A
                     A - T
                     C - G
                     C - G
                     T - A
                     A - T          T G
                    T     C G A T C     A
        A A        A      | + | | |     G
      T     C T C G       G T T A G     C
      G     | | | |                 T T
      G     G A G C
        T G        A     AGGTT
                    A - T
                    A - T
                    G - C
                    A - T
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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