The detailed information of tRNA gene sequence


Sequence ID>SRA1001649
Genome IDSRR001076.44413
Search identical group
Phylum/ClassTilapia Farm, viral fraction from prebead pond at Kent SeaTech (Salton Sea, CA) (SRP000164)
Species
Start position on genome 85
End posion on genome 11
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
aacaagtagc
tRNA gene sequence 
GCCGGATTAGCTCAGCGGTAGAGCAGCGGTTTTGTAAACCGAAGGTCGCGGGTTCAATCC
CTGCATCCGGCACCA
Downstream region at tRNA end position 
tttcaaaaag
Secondary structure (Cloverleaf model)
>SRA1001649	Thr	TGT
                   c      ACCA tttcaaaaag
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     T - A          C T
                    T     C G T C C     A
        G A        A      | | + | |     A
      C     C T C G       G C G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    G   A
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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