The detailed information of tRNA gene sequence


Sequence ID>SRA1001669
Genome IDSRR001078.23870
Search identical group
Phylum/ClassCoral Stressors, viral fraction from whole Porites compressa tissue extracts; an aquarium control experiment (SRP000166)
Species
Start position on genome 43
End posion on genome 118
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
tattttattt
tRNA gene sequence 
GACCCGTTAGCTCAGCTGGTAGAGCATCTCCCTTTTAAGGAGGTGGCCGAAGGTTCGAAT
CCTTCACGGGTCACCA
Downstream region at tRNA end position 
gnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001669	Lys	TTT
                   t      ACCA gnnnnnnnnn
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     C T T C C     A
      C G A        A      | | | | |     G
    T       C T C G       G A A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGCC
                    T + G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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