The detailed information of tRNA gene sequence


Sequence ID>SRA1001671
Genome IDSRR001079.19328
Search identical group
Phylum/ClassCoral Stressors,viral fraction from whole Porites compressa tissue extracts; a temperature stressor experiment (SRP000167)
Species
Start position on genome 95
End posion on genome 11
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position
ncgcctgcat
tRNA gene sequence
GCGGATGTGGCGAAATTGGTAGACGCACCAGATTTAGGTTCTGGCGTAGCAATACGTGAA
GGTTCGAGTCCTTTCATCCGCACCA
Downstream region at tRNA end position
cccctcttgt
Secondary structure (Cloverleaf model)
>SRA1001671	Leu	TAG
                   t      ACCA cccctcttgt
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     T T T C C     A
      T A A        G      + | | | |     G
    T       A G C G       G A A G G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CGTAGCAATACGT
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  T       T
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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