The detailed information of tRNA gene sequence


Sequence ID>SRA1001676
Genome IDSRR001080.19861
Search identical group
Phylum/ClassCoral Stressors, viral fraction from whole Porites compressa tissue extracts; a dissolved organic carbon (DOC) stressor experiment (SRP000168)
Species
Start position on genome 109
End posion on genome 27
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position
nnnnnnnnnc
tRNA gene sequence
GGCCACGTGGAGAAATTGGTAGACTCGCCATCTTGAGGGGGTGGTGCTGCAAGGCGTATG
GGTTCGAATCCCATCGTGGTCACat
Downstream region at tRNA end position
taaaaaggac
Secondary structure (Cloverleaf model)
>SRA1001676	Leu	GAG
                   c      ACat taaaaaggac
                     G - C
                     G + T
                     C - G
                     C - G
                     A - T
                     C - G
                     G - C          T A
                    T     T A C C C     A
      T A A        G      | | | | |     G
    T       A G A G       A T G G G     C
    G         | | |                 T T
    G       A C T C
      T A G        G     TGCTGCAAGGCGT
                    C - G
                    C - G
                    A - T
                    T + G
                    C - G
                  T       G
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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