The detailed information of tRNA gene sequence


Sequence ID>SRA1001680
Genome IDSRR001080.31693
Search identical group
Phylum/ClassCoral Stressors, viral fraction from whole Porites compressa tissue extracts; a dissolved organic carbon (DOC) stressor experiment (SRP000168)
Species
Start position on genome 82
End posion on genome 6
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ataacaataa
tRNA gene sequence 
GTCTCCGTAGCTCAATCGGATAGAGCATCGGTCTTCTAAACCGAAGGTTGAAGGTTCGAA
TCCTTCCGGGGACGCCA
Downstream region at tRNA end position 
ttatannnnn
Secondary structure (Cloverleaf model)
>SRA1001680	Arg	TCT
                   a      GCCA ttatannnnn
                     G - C
                     T - A
                     C - G
                     T + G
                     C - G
                     C - G
                     G - C          T A
                    T     C T T C C     A
      T A A        A      | | | | |     G
    C       C T C G       G A A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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