The detailed information of tRNA gene sequence


Sequence ID>SRA1001686
Genome IDSRR001082.1893
Search identical group
Phylum/ClassCoral Stressors, viral fraction from whole Porites compressa tissue extracts; a nutrient stressor experiment (SRP000170)
Species
Start position on genome 18
End posion on genome 89
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
atgccagaag
tRNA gene sequence 
GCACGGTTAGCTCAACGGCTAGAGCACTTGTTTTACACACAAGGGTTATAGGTTCGAATC
CTATACTGTGTAnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001686	Val	TAC
                   g      Annn nnnnnnnnnn
                     G + T
                     C - G
                     A - T
                     C - G
                     G + T
                     G - C
                     T - A          T A
                    T     T A T C C     A
      C A A        A      | | | | |     G
    G       C T C G       A T A G G     C
    G       | | | |                 T T
    C       G A G C
      T A          A     GGTT
                    C - G
                    T - A
                    T - A
                    G - C
                    T - A
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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