The detailed information of tRNA gene sequence


Sequence ID>SRA1001689
Genome IDSRR001085.45229
Search identical group
Phylum/ClassCoral Stressors, microbial fraction from whole Porites compressa tissue extracts; a temperature stressor experiment (SRP000173)
Species
Start position on genome 106
End posion on genome 22
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
tttacaactt
tRNA gene sequence 
GGAGGGGTTCCCGAGCGGCCAAAGGGATCAGACTGTAAATCTGACGGCTCTGCCTTCGCT
GGTTCGAATCCAGCCCCCTCCACCA
Downstream region at tRNA end position 
agttgtacaa
Secondary structure (Cloverleaf model)
>SRA1001689	Tyr	GTA
                   t      ACCA agttgtacaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G A C C     A
      C G A        T      | | | | |     G
    G       G C C C       G C T G G     C
    G         | | |                 T T
    C       A G G G
      C A A        A     CGGCTCTGCCTTC
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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