The detailed information of tRNA gene sequence


Sequence ID>SRA1001690
Genome IDSRR001085.59044
Search identical group
Phylum/ClassCoral Stressors, microbial fraction from whole Porites compressa tissue extracts; a temperature stressor experiment (SRP000173)
Species
Start position on genome 15
End posion on genome 86
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gattaagaat
tRNA gene sequence 
GGCCTGTTGGTCTAGTGGCATGATTCTCGCTTTGGGTGCGAGAGGTCCCGGGTTCGACTC
CCGGACAGGCCCatt
Downstream region at tRNA end position 
tttctggttt
Secondary structure (Cloverleaf model)
>SRA1001690	Pro	TGG
                   t      Catt tttctggttt
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C
                     T - A          T C
                    T     G G C C C     A
        G A        G      | | | | |     G
      T     T C T G       C C G G G     C
      G       | | +                 T T
      G     T G A T
        C A        T     AGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  T       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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