The detailed information of tRNA gene sequence


Sequence ID>SRA1001693
Genome IDSRR001088.58388
Search identical group
Phylum/ClassCoral Stressors, microbial fraction from whole Porites compressa tissue extracts; a nutrient stressor experiment (SRP000176)
Species
Start position on genome 21
End posion on genome 95
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
caccatatcT
tRNA gene sequence 
GGTCCGTTAGCTCAGTCGGCAGAGCGTGGTGCTGATAACGCCAAGGTCGTGAGTTCAAAC
CTCACACGGACCAAnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001693	Ile	GAT
                   T      AAnn nnnnnnnnnn
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     G - C
                     T - A          C A
                    T     C A C T C     A
      T G A        A      | | | | |     A
    C       C T C G       G T G A G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTC
                    T - A
                    G - C
                    G - C
                    T + G
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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