The detailed information of tRNA gene sequence


Sequence ID>SRA1001696
Genome IDSRR001308.1717
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 82
End posion on genome 157
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
aaatagtagt
tRNA gene sequence 
GGTCGCATAGCTCAGTTGGGAGAGCACCTGCCTTACAAGCAGGGGGTCATTGGTTCGAGC
CCAATTGTGACCACCA
Downstream region at tRNA end position 
tttttatgga
Secondary structure (Cloverleaf model)
>SRA1001696	Val	TAC
                   t      ACCA tttttatgga
                     G - C
                     G - C
                     T - A
                     C - G
                     G + T
                     C - G
                     A - T          C G
                    T     T A A C C     A
      T G A        A      | | | | |     G
    T       C T C G       A T T G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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