The detailed information of tRNA gene sequence


Sequence ID>SRA1001697
Genome IDSRR001308.2030
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 241
End posion on genome 165
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
tttgtgcttt
tRNA gene sequence 
GTGCCCGTAGCTCAGTCGGATAGAGCATCAGCCTTCTAAGCTGAGGGTCGGGGGTTCGAT
CCCCTCCGGGCACGCCA
Downstream region at tRNA end position 
attccctatt
Secondary structure (Cloverleaf model)
>SRA1001697	Arg	TCT
                   t      GCCA attccctatt
                     G - C
                     T - A
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          C T
                    T     C T C C C     A
      T G A        A      | + | | |     G
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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