The detailed information of tRNA gene sequence


Sequence ID>SRA1001699
Genome IDSRR001308.3403
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 58
End posion on genome 134
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tgcgcagctt
tRNA gene sequence 
CGGGGTGTAGCGCAGCCTGGTAGCGCAACTGGTTTGGGACCAGTGGGTCGAAGGTTCGAA
TCCTTTCACCCCGACCA
Downstream region at tRNA end position 
tcattcgaca
Secondary structure (Cloverleaf model)
>SRA1001699	Pro	TGG
                   t      ACCA tcattcgaca
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T T T C C     A
      C G A        A      + | | | |     G
    C       C G C G       G A A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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