The detailed information of tRNA gene sequence


Sequence ID>SRA1001705
Genome IDSRR001308.6095
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 202
End posion on genome 274
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cgcgactcaa
tRNA gene sequence 
GGGGGCATAGCTCAGCTGGGAGAGCACCGGCTTTGCAAGCCGGGGGTCGTCGGTTCGATC
CCGACTGCCTCCAnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001705	Ala	TGC
                   a      Annn nnnnnnnnnn
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     C - G
                     A - T          C T
                    T     C A G C C     A
      C G A        A      | | | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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