The detailed information of tRNA gene sequence


Sequence ID>SRA1001706
Genome IDSRR001308.8058
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 137
End posion on genome 210
Amino Acid Gly
Anticodon CCC
Upstream region at tRNA start position 
acagccccgc
tRNA gene sequence 
GCGGGTGTAGCTCAATGGTAGAGCAGAAGCTTCCCAAGCTTACGACGAGGGTTCGATTCC
CTTCACCCGCTCCA
Downstream region at tRNA end position 
gcctgtcgtc
Secondary structure (Cloverleaf model)
>SRA1001706	Gly	CCC
                   c      TCCA gcctgtcgtc
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     T T C C C     A
        A A        A      + | | | |     G
      T     C T C G       G A G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     CGAC
                    G   A
                    A - T
                    A - T
                    G - C
                    C - G
                  T       A
                  T       A
                    C C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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