The detailed information of tRNA gene sequence


Sequence ID>SRA1001718
Genome IDSRR001308.11897
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 157
End posion on genome 230
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
ggcggcaact
tRNA gene sequence 
GCTGGCGTAGCTCACTTGGTAGAGCGGCTGACTTGTAATCAGCAGGCAGCGGGTTCGATT
CCCGCCGCCAGCTCtt
Downstream region at tRNA end position 
tgaaaattcc
Secondary structure (Cloverleaf model)
>SRA1001718	Thr	TGT
                   t      TCtt tgaaaattcc
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     C - G
                     G - C          T T
                    T     C G C C C     A
      T C A        A      | | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGCA
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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