The detailed information of tRNA gene sequence


Sequence ID>SRA1001735
Genome IDSRR001308.21807
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 80
End posion on genome 155
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
cacgcagcgg
tRNA gene sequence 
GCCGATGTAGCTCAGTCGGTAGAGCAACGCATTCGTAATGCGTAGGTCGACGGTTCAAGT
CCGTTCGTCGGCTCCA
Downstream region at tRNA end position 
catttttcct
Secondary structure (Cloverleaf model)
>SRA1001735	Thr	CGT
                   g      TCCA catttttcct
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     T + G
                     G - C          T G
                    T     T T G C C     A
      T G A        A      + | | | |     A
    C       C T C G       G A C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    A - T
                    C - G
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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