The detailed information of tRNA gene sequence


Sequence ID>SRA1001738
Genome IDSRR001308.22212
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 174
End posion on genome 98
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
cgcctgcaac
tRNA gene sequence 
GCACCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGAAGGCAGAGGCCACAAGTTCGAA
TCTTGTCGGGTGCGCCA
Downstream region at tRNA end position 
ttcctgtttt
Secondary structure (Cloverleaf model)
>SRA1001738	Arg	CCG
                   c      GCCA ttcctgtttt
                     G - C
                     C - G
                     A - T
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T G T T C     A
      C G A        A      | | | | |     G
    T       C T C G       A C A A G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     AGGCC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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