The detailed information of tRNA gene sequence


Sequence ID>SRA1001742
Genome IDSRR001308.23632
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 175
End posion on genome 88
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgccgcaccc
tRNA gene sequence 
GGAGAGGTGGCAGAGCGGTTCAACGCGCCAGACTTGAAATCTGGTATGGGCTTCGGCCCA
TCGGGGGTTCGAATCCCCCCCTCTCCGCtt
Downstream region at tRNA end position 
cacgtcggcg
Secondary structure (Cloverleaf model)
>SRA1001742	Ser	TGA
                   c      GCtt cacgtcggcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    G       G A C G       G G G G G     C
    G           | |                 T T
    T       A C G C
      T C A        G     TATGGGCTTCGGCCCATC
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK