The detailed information of tRNA gene sequence


Sequence ID>SRA1001750
Genome IDSRR001308.29606
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 154
End posion on genome 229
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
ccggtccatc
tRNA gene sequence 
GGCCGGGTAGCTCAGTTGGTAGAGCAGGGGATTGAAAATCCCCGTGTCGGGGGTTCGATT
CCCTCCCCGGCCACCA
Downstream region at tRNA end position 
tcggaatagc
Secondary structure (Cloverleaf model)
>SRA1001750	Phe	GAA
                   c      ACCA tcggaatagc
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C          T T
                    T     C T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G - C
                    G - C
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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