The detailed information of tRNA gene sequence


Sequence ID>SRA1001752
Genome IDSRR001308.31988
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 224
End posion on genome 149
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
agcccagcgt
tRNA gene sequence 
GGACGCATAGCTCAGTTGGTAGAGCAGCTGACTCTTAATCAGCGGGTCCTAGGTTCGAGC
CCTAGTGCGTCCACCA
Downstream region at tRNA end position 
tttttcgcgc
Secondary structure (Cloverleaf model)
>SRA1001752	Lys	CTT
                   t      ACCA tttttcgcgc
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C
                     C - G
                     A - T          C G
                    T     G A T C C     A
      T G A        A      | | | | |     G
    T       C T C G       C T A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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