The detailed information of tRNA gene sequence


Sequence ID>SRA1001757
Genome IDSRR001308.34613
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 95
End posion on genome 170
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcaatcttaT
tRNA gene sequence 
GGCACGGTAGCTCAGTTGGTTAGAGCGGGCGACTCATAATCGCCAGGTCGGGGGTTCGAG
CCCCCCCTGTGCTAAat
Downstream region at tRNA end position 
ctttttattg
Secondary structure (Cloverleaf model)
>SRA1001757	Met	CAT
                   T      AAat ctttttattg
                     G + T
                     G - C
                     C - G
                     A - T
                     C - G
                     G + T
                     G - C          C G
                    T     C C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    G - C
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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