The detailed information of tRNA gene sequence


Sequence ID>SRA1001766
Genome IDSRR001308.41882
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 106
End posion on genome 179
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gcgaaggttt
tRNA gene sequence 
GGCGCGGTAGCAAAGCGGTTATGCCCCGGATTGCAAATCCGGTTAGTCCGGTTCGACTCC
GGACCGCGCCTCCA
Downstream region at tRNA end position 
gaacctcgat
Secondary structure (Cloverleaf model)
>SRA1001766	Cys	GCA
                   t      TCCA gaacctcgat
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T C
                    T     A G G C C     A
        G A        A      | | | | |     G
      C     A A C G       T C C G G     C
      G       | | |                 T T
      G     A T G C
        T T        C     TTAG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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