The detailed information of tRNA gene sequence


Sequence ID>SRA1001767
Genome IDSRR001308.42067
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 104
End posion on genome 29
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
ccgctggcga
tRNA gene sequence 
GCCGCTTTAGCTCAGTTGGTAGAGCATCGCATTCGTAATGCGGGGGTCACAGGTTCGAGT
CCTGTAAGCGGCACCA
Downstream region at tRNA end position 
gtcatgaaaa
Secondary structure (Cloverleaf model)
>SRA1001767	Thr	CGT
                   a      ACCA gtcatgaaaa
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     T - A
                     T - A          T G
                    T     T G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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