The detailed information of tRNA gene sequence


Sequence ID>SRA1001771
Genome IDSRR001308.45593
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 89
End posion on genome 162
Amino Acid Gly
Anticodon CCC
Upstream region at tRNA start position 
ccgtggtttg
tRNA gene sequence 
GCGGGTGTAGCTCAATGGTAGAGCAGCAGCTTCCCAAGCTGAATACGAGGGTTCGATTCC
CTTCACCCGCTCCA
Downstream region at tRNA end position 
tctctcctag
Secondary structure (Cloverleaf model)
>SRA1001771	Gly	CCC
                   g      TCCA tctctcctag
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     T T C C C     A
        A A        A      + | | | |     G
      T     C T C G       G A G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     ATAC
                    G   A
                    C - G
                    A - T
                    G - C
                    C - G
                  T       A
                  T       A
                    C C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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