The detailed information of tRNA gene sequence


Sequence ID>SRA1001772
Genome IDSRR001308.46401
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 171
End posion on genome 96
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
gtgcgttgga
tRNA gene sequence 
GAGTCGGTAGCTCAGTCGGTAGAGCATCGCCCTTTTAAGGCGAGGGTCCTGGGTTCGAAT
CCCAGCCGACTCACCA
Downstream region at tRNA end position 
caataaatca
Secondary structure (Cloverleaf model)
>SRA1001772	Lys	TTT
                   a      ACCA caataaatca
                     G - C
                     A - T
                     G - C
                     T - A
                     C - G
                     G - C
                     G - C          T A
                    T     G A C C C     A
      T G A        A      | | | | |     G
    C       C T C G       C T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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