The detailed information of tRNA gene sequence


Sequence ID>SRA1001773
Genome IDSRR001308.47207
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 50
End posion on genome 134
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
aaagtagaat
tRNA gene sequence 
GGCCACGTGGTGGAATTGGTAGACACGCTACTTTGAGGGGGTAGTGCTCGTAAGGGTATG
GGAGTTCGACTCTCCCCGTGGTCACat
Downstream region at tRNA end position 
ttttaaaacc
Secondary structure (Cloverleaf model)
>SRA1001773	Leu	GAG
                   t      ACat ttttaaaacc
                     G - C
                     G + T
                     C - G
                     C - G
                     A - T
                     C - G
                     G - C          T C
                    T     C C C T C     A
      T A A        G      | | | | |     G
    T       G G T G       G G G A G     C
    G         | | |                 T T
    G       A C A C
      T A G        G     TGCTCGTAAGGGTAT
                    C - G
                    T - A
                    A - T
                    C - G
                    T + G
                  T       G
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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