The detailed information of tRNA gene sequence


Sequence ID>SRA1001774
Genome IDSRR001308.48711
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 97
End posion on genome 20
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position
ggatacaatc
tRNA gene sequence
AGATCCGTAGCTCAGCCTGGTTAGAGCACTACACTGATAATGTAGGGGTCTCCAGTTCAA
ATCTGGACGGGTCTACTA
Downstream region at tRNA end position
taaaagctgc
Secondary structure (Cloverleaf model)
>SRA1001774	Ile	GAT
                   c      ACTA taaaagctgc
                     A - T
                     G - C
                     A - T
                     T + G
                     C - G
                     C - G
                     G - C          T A
                    T     A G G T C     A
    C C G A        A      | | | | |     A
  T         C T C G       T C C A G     C
  G         | | | |                 T T
  G         G A G C
    T T A          A     GGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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