The detailed information of tRNA gene sequence


Sequence ID>SRA1001775
Genome IDSRR001308.48788
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 144
End posion on genome 218
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
attacaataa
tRNA gene sequence 
GCAGTGTTAGTTTAATTGGTAAAACTATAGCCTTCCAAGCTAAGGTCATCGGTTCAAATC
CGATACGCTGCTCCA
Downstream region at tRNA end position 
atataaagag
Secondary structure (Cloverleaf model)
>SRA1001775	Gly	TCC
                   a      TCCA atataaagag
                     G - C
                     C - G
                     A - T
                     G - C
                     T + G
                     G - C
                     T - A          T A
                    T     T A G C C     A
      T A A        A      | | | | |     A
    T       T T T G       A T C G G     C
    G       | | | |                 T T
    G       A A A C
      T A          T     GGTC
                    A   A
                    T - A
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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