The detailed information of tRNA gene sequence


Sequence ID>SRA1001779
Genome IDSRR001308.50230
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 143
End posion on genome 219
Amino Acid Arg
Anticodon ACG
Upstream region at tRNA start position 
aaaaatcaga
tRNA gene sequence 
GGCTTCGTAGCTCAATTGGATAGAGCATCTGACTACGGATCAGAAGGTTGCAGGTTCGAA
TCCTGCCGAGGTCACGA
Downstream region at tRNA end position 
ataataaaca
Secondary structure (Cloverleaf model)
>SRA1001779	Arg	ACG
                   a      ACGA ataataaaca
                     G - C
                     G + T
                     C - G
                     T + G
                     T - A
                     C - G
                     G - C          T A
                    T     C G T C C     A
      T A A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTT
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       G
                    A C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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