The detailed information of tRNA gene sequence


Sequence ID>SRA1001780
Genome IDSRR001308.51124
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 147
End posion on genome 71
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
cgcgcagcac
tRNA gene sequence 
GCACCCGTAGCTCAGCTGGATAGAGTGCTGCCCTCCGAAGGCAGAGGTCACAGGTTCGAA
TCCTGTCGGGTGCGCCA
Downstream region at tRNA end position 
ataaaatcaa
Secondary structure (Cloverleaf model)
>SRA1001780	Arg	CCG
                   c      GCCA ataaaatcaa
                     G - C
                     C - G
                     A - T
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T G T C C     A
      C G A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | +                 T T
    G       G A G T
      A T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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