The detailed information of tRNA gene sequence


Sequence ID>SRA1001782
Genome IDSRR001308.52023
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 100
End posion on genome 25
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tccaggttac
tRNA gene sequence 
GACCCTATCGTCTAGAGGCCTAGGACATCACCCTTTCACGGTGAGTACCGGGGTTCGAAT
CCCCGTAGGGTCGCCA
Downstream region at tRNA end position 
agttttgtgg
Secondary structure (Cloverleaf model)
>SRA1001782	Glu	TTC
                   c      GCCA agttttgtgg
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     T - A
                     A - T          T A
                    T     G C C C C     A
      A G A        C      | | | | |     G
    G       T C T G       C G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     GTAC
                    T - A
                    C - G
                    A - T
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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