The detailed information of tRNA gene sequence


Sequence ID>SRA1001787
Genome IDSRR001308.53374
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 143
End posion on genome 70
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
tttctggttt
tRNA gene sequence 
GAGGGCGTAGCTCAGTCGGTAGAGCATCGGACTTTTAATCCGTGGGTCGTGGGTTCAAGT
CCCACCGCCCTCACtt
Downstream region at tRNA end position 
ccagttatca
Secondary structure (Cloverleaf model)
>SRA1001787	Lys	TTT
                   t      ACtt ccagttatca
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C A C C C     A
      T G A        A      | | | | |     A
    C       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T   T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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