The detailed information of tRNA gene sequence


Sequence ID>SRA1001789
Genome IDSRR001308.53743
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 47
End posion on genome 134
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cgagcattcg
tRNA gene sequence 
GGAGAGGTGGCAGAGCGGTTGAATGCGTCAGTCTCGAAAACTGATTTACCCGCAAGGGTA
ACGAGGGTTCGAATCCCTCCCTCTCCGCat
Downstream region at tRNA end position 
cattgttggc
Secondary structure (Cloverleaf model)
>SRA1001789	Ser	CGA
                   g      GCat cattgttggc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G A C G       G A G G G     C
    G         | | |                 T T
    T       A T G C
      T G A        G     TTTACCCGCAAGGGTAAC
                    T - A
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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