The detailed information of tRNA gene sequence


Sequence ID>SRA1001791
Genome IDSRR001308.58302
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 120
End posion on genome 46
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaaattagcc
tRNA gene sequence 
GGCGAGGTAGCTCAGATGGTTAGAGCGCAGGATTCATAACCCTGAGGTCACGGGTTCAAT
TCCCGTCCTCGCTACac
Downstream region at tRNA end position 
agaggttgtt
Secondary structure (Cloverleaf model)
>SRA1001791	Met	CAT
                   c      ACac agaggttgtt
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T T
                    T     T G C C C     A
      A G A        A      | | | | |     A
    T       C T C G       A C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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