The detailed information of tRNA gene sequence


Sequence ID>SRA1001794
Genome IDSRR001308.58397
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 95
End posion on genome 21
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
ataaacaaat
tRNA gene sequence 
GGTCCCGTAGTTCAATGGATAGAACGAAAGTTTCCTAAACTTTAGATACAAGTTCGATTC
TTGTCGGGACTACTA
Downstream region at tRNA end position 
aaaatcgtag
Secondary structure (Cloverleaf model)
>SRA1001794	Arg	CCT
                   t      ACTA aaaatcgtag
                     G + T
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C          T T
                    T     T G T T C     A
      T A A        A      | | | | |     G
    G       C T T G       A C A A G     C
    G       | | | |                 T T
    A       G A A C
      T A          G     AGAT
                    A - T
                    A - T
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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